BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB003F08SP1|AL425158
(941 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1638 1586 0.0
>3x_Contig1638
Length = 14042
Score = 1586 bits (782), Expect = 0.0
Identities = 866/915 (94%), Gaps = 1/915 (0%)
Strand = Plus / Minus
Query: 1 aggaagattaacagcaactaccttatcacctctgagatctactaagrrtgctacgactcc 60
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 9925 aggaagattaacagcaactaccttatcacctctgagatctactaaaaatgctacgactcc 9866
Query: 61 tcaragggtcagatcgcctagtgaragtrgcgacgatctacctagacgtgtcaattccct 120
||| |||||||||||||||||||| ||| |||||||||||||||||||||||||||||||
Sbjct: 9865 tcaaagggtcagatcgcctagtgaaagtagcgacgatctacctagacgtgtcaattccct 9806
Query: 121 aarcttgaacaaccatatgttgcragaggaatcgtggaaacgagctgcagargtkacgar 180
|| |||||||||||||||||||| ||||||||||||||||||||||||||| || ||||
Sbjct: 9805 aaacttgaacaaccatatgttgcaagaggaatcgtggaaacgagctgcagaagttacgaa 9746
Query: 181 ccaattargggcacgtgtagrgagrgtgagggccaaatccaggtccggtttcaacaatct 240
||||||| ||||||| ||| || ||||||||||||||||||||||||||||||||||
Sbjct: 9745 ccaattaaaggcacgtatagaaagaatgagggccaaatccaggtccggtttcaacaatct 9686
Query: 241 cggcgtagattaagagnatccnctatgtncnaratagnttcctgtataarcgrcgaattg 300
|||||||||||||||| |||| |||||| | | |||| ||||||||||| || |||||||
Sbjct: 9685 cggcgtagattaagagaatccactatgtacaaaatagattcctgtataaacgacgaattg 9626
Query: 301 agcgcraactccgacatgacaaccagagagggaagcttccagtcacatgacctagaatgc 360
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9625 agcgcaaactccgacatgacaaccagagagggaagcttccagtcacatgacctagaatgc 9566
Query: 361 gtatgttgtcccgggtaatatatagcracgtcttctctctgcttatctctggtgcrgcct 420
||| ||||||||||||||||||||| |||||||||||||||||||||||||||| ||||
Sbjct: 9565 atatattgtcccgggtaatatatagcaacgtcttctctctgcttatctctggtgcagcct 9506
Query: 421 cctagtttttccgaraagtttctttttctccaarrttctccgaraatcgtcagatattcc 480
|||||||||||||| |||||||||||||||||| |||||||| ||||||||||||||||
Sbjct: 9505 cctagtttttccgaaaagtttctttttctccaaaattctccgaaaatcgtcagatattcc 9446
Query: 481 agatatgcractagaggggagatacaccgttatatgcgtttcagratgcaaatracggca 540
|||||||| ||||||||| |||||||||||||||||| ||||| |||||||| ||||||
Sbjct: 9445 agatatgcaactagagggaagatacaccgttatatgcatttcaaaatgcaaataacggca 9386
Query: 541 actragcccatcactctcagcacgtttcttttccatgcacgtcgttcccactgatgattc 600
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9385 actaagcccatcactctcagcacgtttcttttccatgcacgtcgttcccactgatgattc 9326
Query: 601 ctcgggtcagttgatgcgattttkracaacagccaaagcagacatcctccaagccgtatc 660
||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 9325 ctcggatcagttgatgcgatttttaacaacagccaaagcagacatcctccaagccgtatc 9266
Query: 661 ccagacaaatacractctatctctgtgagggattcgtgt-gactggaattcagctgaggt 719
|||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 9265 ccagacaaatacaactctatctctgtgagggattcgtgtaaactggaattcagctgaggt 9206
Query: 720 atttctttttacaggattgcgcttccagtaaattcggtctgttccattgcgacttgttga 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9205 atttctttttacaggattgcgcttccagtaaattcggtctgttccattgcgacttgttga 9146
Query: 780 atggcattggcgatgccaatgcccaattccatgggcaacgagtaagtragtctcttctac 839
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 9145 atggcattggcgatgccaatgcccaattccatgggcaacgagtaagtaagtctcttctac 9086
Query: 840 atcgtcctattcctttcctaatgtgagctctttttaccttttggtacccatacaacgagt 899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9085 atcgtcctattcctttcctaatgtgagctctttttaccttttggtacccatacaacgagt 9026
Query: 900 gtcatggggagagga 914
|||||||||||||||
Sbjct: 9025 gtcatggggagagga 9011
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.41 0.716 1.33
Gapped
Lambda K H
1.41 0.716 1.33
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3502
Number of Sequences: 1807
Number of extensions: 3502
Number of successful extensions: 71
Number of sequences better than 1.0e-20: 1
length of query: 941
length of database: 10,358,551
effective HSP length: 16
effective length of query: 925
effective length of database: 10,329,639
effective search space: 9554916075
effective search space used: 9554916075
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.4 bits)
S1: 12 (24.8 bits)
S2: 49 (99.9 bits)